merfish3d-wfacq¶

merfish3d-wfacq provides qi2lab 3D MERFISH widefield acquisition on top of pymmcore-gui, pymmcore-plus, and ome-writers.

Documentation¶

• Quickstart
• Preparing input files
• MERFISH widget usage
• API overview
• Launch and GUI integration
• Preparation and normalization
• Execution and custom actions
• Writing and datastore setup

Local docs¶

Install the development dependencies and run Zensical locally:

& 'C:\Users\dpshe\miniforge3\envs\merfish3d-wfacq\python.exe' -m pip install -e .[dev]
zensical preview

Build the static site into site/:

zensical build

Project links¶

• Source: https://www.github.com/qi2lab/merfish3d-wfacq
• Issue tracker: https://www.github.com/qi2lab/merfish3d-wfacq/issues